Gauss map analysys of proteins, temporal page.

Created 18/09/2004,
by Akihiro Takiyama.
Last updated 07/10/2004.

Unassembled polyomavirus VP1 pentamer
Virus coat protein of Simian virus 40
Wild type VP1 of JC virus

RAS
H-RAS P21 protein mutant with ASP 38 replaced by GLU (D38E)
H-RAS P21 protein mutant with GLY 12 replaced by ARG (G12R)
H-RAS P21 protein mutant with GLY 12 replaced by VAL (G12V)
H-RAS P21 protein mutant with GLN 61 replaced by HIS (Q61H)>
H-RAS P21 protein mutant with GLN 61 replaced by LEU (Q61L)
C-H-RAS P21 protein (residues 1 - 166) mutant with GLY 12

RAF

CRK
C-CRK (N-terminal SH3 domain) (C-CRKSH3-N) complexed with 2 C3G peptide (PRO-PRO-PRO-ALA-LEU-PRO-PRO-LYS-LYS-ARG)
C-CRK (N-terminal SH3 domain) (C-CRKSH3-N) complexed with 2 SOS peptide (PRO-PRO-PRO-VAL-PRO-PRO-ARG-ARG-ARG-ARG)

Unassembled polyomavirus VP1 pentamer

18/09/2004

Protein Data Bank (html format) .

The total Gauss map of subunit A of vp1:

The second order Gauss map of subunit A of vp1:

Gauss map of alpha-helix regions of subunit A of vp1:

Gauss map of beta-strand regions of subunit A of vp1:

Virus coat protein of Simian virus 40

20/09/2004

Protein Data Bank (html format) .

The total Gauss map of chain 1 of SV40:

The second order Gauss map of chain 1 of SV40:

Gauss map of alpha-helix regions of chain 1 of SV40:

Gauss map of beta-strand regions of chain 1 of SV40:

Wild type VP1 of JC virus

20/09/2004

Prediction of 3D-structure text format.

Predicted 3D structure:

Gauss map of the above data:

The second order Gauss map of the above data:

3D verify:

ERRAT

RAF

02/10/2004

The total Gauss map of RAF:

The second order Gauss map of RAF:

Gauss map of alpha-helix regions of RAF:

The second order Gauss map of alpha-helix regions of RAF:

Gauss map of beta-strand regions of RAF:

The second order Gauss map of beta-strand regions of RAF:

RAS

02/10/2004

The total Gauss map of RAS:

The second order Gauss map of RAS:

Gauss map of alpha-helix regions of RAS:

Gauss map of beta-strand regions of RAS:

H-RAS P21 protein mutant with ASP 38 replaced by GLU (D38E)

07/10/2004

Gauss map of 221P:

Second order Gauss map of 221P:

Third order Gauss map of 221P:

H-RAS P21 protein mutant with GLY 12 replaced by ARG (G12R)

07/10/2004

Gauss map of 421P:

Second order Gauss map of 421P:

Third order Gauss map of 421P:

H-RAS P21 protein mutant with GLY 12 replaced by VAL (G12V)

07/10/2004

Gauss map of 521P:

Second order Gauss map of 521P:

Third order Gauss map of 521P:

H-RAS P21 protein mutant with GLN 61 replaced by HIS (Q61H)

07/10/2004

Gauss map of 621P:

Second order Gauss map of 621P:

Third order Gauss map of 621P:

H-RAS P21 protein mutant with GLN 61 replaced by LEU (Q61L)

07/10/2004

Gauss map of 721P:

Second order Gauss map of 721P:

Third order Gauss map of 721P:

C-H-RAS P21 protein (residues 1 - 166) mutant with GLY 12

07/10/2004

Gauss map of 821P:

Second order Gauss map of 821P:

Third order Gauss map of 821P:

CRK

04/10/2004

Predicted 3D structure of "CRK"(D10656, 20th-120th aa. sub-sequence):

3D Verify:

The total Gauss map of "CRK":

The second order Gauss map of "CRK":

The third order Gauss map of "CRK":

C-CRK (N-terminal SH3 domain) (C-CRKSH3-N) complexed with 2 C3G peptide (PRO-PRO-PRO-ALA-LEU-PRO-PRO-LYS-LYS-ARG)

08/10/2004

Gauss map of 1CKA:

Second order Gauss map of 1CKA:

Third order Gauss map of 1CKA:

C-CRK (N-terminal SH3 domain) (C-CRKSH3-N) complexed with 2 SOS peptide (PRO-PRO-PRO-VAL-PRO-PRO-ARG-ARG-ARG-ARG)

08/10/2004

Gauss map of 1CKB:

Second order Gauss map of 1CKB:

Third order Gauss map of 1CKB:

copyright(c)2004 Akihiro Takiyama